Habitability analyses of aquatic bacteria     

Md. Nurul Haider  Masahiko Nishimura  Minoru Ijichi  Ching-chia Yang  Wataru Iwasaki  Kazuhiro Kogure 《Journal of Oceanography》2018,74(2):197-207

Habitability is defined as an ability of an organism to inhabit different environments. Habitability of organisms, however, cannot be inferred from analyses such as a whole genome or community structures. A recently developed database, the MetaMetaDB, gives us information from what kind of environments one particular 16S rRNA sequence data has ever been obtained, and thus enables us to infer the habitability of the bacterium in question. In order to check the applicability of this database to study the habitability of aquatic bacteria, samples collected at two Naka River stations, one estuarine station from Naka River Estuary, two coastal stations at Oarai in Ibaraki Prefecture, Japan and one station in the Kuroshio Current of the western North Pacific were examined. The phylotypes were tracked against the MetaMetaDB and it was reasonably found that the low-salinity stations were dominated by sequences with “freshwater and groundwater”, “human” and “wastewater” habitat identities, while the high-salinity stations were dominated by those with a “marine” identity. The phylotypes of low-salinity stations with a particular habitat identity were absent or rare in the high-salinity stations and vice versa. The MetaMetaDB also showed that sequences of Cyanobacteria or related phylogenetic groups may be present in the human gut, as well as the probable distribution of the relatives (ancestors/descendants/siblings) of some bacteria. These overall findings proved that the MetaMetaDB is useful as a new tool to infer microbial habitability and it gives us new information on the possible origin and ecology of microorganisms in the environments.  相似文献   

Tide-related Changes in mRNA Abundance of Aromatases and Estrogen Receptors in the Ovary and Brain of the Threespot Wrasse <Emphasis Type="Italic">Halichoeres trimaculatus</Emphasis>     

Dae-Ju Oh  Sung-Pyo Hur  Selma Bouchekioua  Yuki Takeuchi  Shingo Udagawa  Neelakanteswar Aluru  Yong-Ju Park  Ji-Gweon Park  Se-Jae Kim  Thomas W. Moon  Mathilakath M. Vijayan  Akihiro Takemura 《Ocean Science Journal》2018,53(2):239-249

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Dark energy cosmological models with cosmic string     

T. Vinutha  V. U. M. Rao  Bekele Getaneh  Molla Mengesha 《Astrophysics and Space Science》2018,363(9):188

In this paper we have studied the anisotropic Kantowski-Sachs, locally rotationally symmetric (LRS) Bianchi type-I and LRS Bianchi type-III geometries filled with dark energy and one dimensional cosmic string in the Saez-Ballester theory of gravitation. To get physically valid solution we take hybrid expansion law of the average scale factor which is a product of power and exponential type of functions that results in time dependent deceleration parameter (\(q\)). The equation of state parameter of dark energy (\(\omega _{\mathit{de}}\)) has been discussed and we have observed that for the three models it crosses the phantom divide line (\(\omega _{\mathit{de}} = -1\)) and shows quintom like behavior. The density of dark energy (\(\rho _{\mathit{de}}\)) is an increasing function of redshift and remains positive throughout the evolution of the universe for the three models. Moreover in Kantowski-Sachs and LRS Bianchi type-I geometries the dark energy density dominates the string tension density (\(\lambda \)) and proper density (\(\rho \)) throughout the evolution of the universe. The physical and geometrical aspects of the statefinder parameters (\(r,s\)), squared speed of sound (\(v_{s}^{2} \)) and \(\omega _{\mathit{de}}\)–\(\omega ^{\prime }_{\mathit{de}}\) plane are also discussed.  相似文献   

An on Orbit Determination of Point Spread Functions for the <Emphasis Type="Italic">Interface Region Imaging Spectrograph</Emphasis>     

Hans Courrier  Charles Kankelborg  Bart De Pontieu  Jean-Pierre Wülser 《Solar physics》2018,293(9):125

Using the 2016 Mercury transit of the Sun, we characterize on orbit spatial point spread functions (PSFs) for the Near- (NUV) and Far- (FUV) Ultra-Violet spectrograph channels of NASA’s Interface Region Imaging Spectrograph (IRIS). A semi-blind Richardson–Lucy deconvolution method is used to estimate PSFs for each channel. Corresponding estimates of Modulation Transfer Functions (MTFs) indicate resolution of 2.47 cycles/arcsec in the NUV channel near 2796 Å and 2.55 cycles/arcsec near 2814 Å. In the short (\({\approx}\,1336~\mathring{\mathrm{A}}\)) and long (\({\approx}\,1394~\mathring{\mathrm{A}}\)) wavelength FUV channels, our MTFs show pixel-limited resolution (3.0 cycles/arcsec). The PSF estimates perform well under deconvolution, removing or significantly reducing instrument artifacts in the Mercury transit spectra. The usefulness of the PSFs is demonstrated in a case study of an isolated explosive event. PSF estimates and deconvolution routines are provided through a SolarSoft module.  相似文献   

Template-based classification of SDSS-<Emphasis Type="BoldItalic">GALEX</Emphasis> point sources     

Ayesha Anjum  Mousumi Das  Jayant Murthy  S. B. Gudennavar  Rajesh Gopal  S. G. Bubbly 《Journal of Astrophysics and Astronomy》2018,39(5):61

We have classified a sample of 37,492 objects from SDSS into QSOs, galaxies and stars using photometric data over five wave bands (u, g, r, i and z) and UV GALEX data over two wave bands (near-UV and far-UV) based on a template fitting method. The advantage of this method of classification is that it does not require any spectroscopic data and hence the objects for which spectroscopic data is not available can also be studied using this technique. In this study, we have found that our method is consistent by spectroscopic methods given that their UV information is available. Our study shows that the UV colours are especially important for separating quasars and stars, as well as spiral and starburst galaxies. Thus it is evident that the UV bands play a crucial role in the classification and characterization of astronomical objects that emit over a wide range of wavelengths, but especially for those that are bright at UV. We have achieved the efficiency of 89% for the QSOs, 63% for the galaxies and 84% for the stars. This classification is also found to be in agreement with the emission line diagnostic diagrams.  相似文献   

Maximizing the community exploitation of the VLTI 2nd-generation instruments     

Stefan Kraus  Paulo Garcia  Guy Perrin 《Experimental Astronomy》2018,46(3):511-516

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Ring of Station Method in Research of Cosmic Ray Variations: 1. General Description     

Abunina  M. A.  Belov  A. V.  Eroshenko  E. A.  Abunin  A. A.  Oleneva  V. A.  Yanke  V. G.  Melkumyan  A. A. 《Geomagnetism and Aeronomy》2020,60(1):38-45

Geomagnetism and Aeronomy - For over 60 years, neutron monitors have remained the main standard, stable instrument for the measurement of cosmic rays with energies from 400 MeV to hundreds of GeV....  相似文献   

Ion Pressure in Different Regions of the Dayside Auroral Precipitation     

Vorobjev  V. G.  Yagodkina  O. I.  Antonova  E. E. 《Geomagnetism and Aeronomy》2020,60(6):727-736

Geomagnetism and Aeronomy - The ion pressure in the regions of ionospheric projections of the plasma mantle, polar cusp, low-latitude boundary layer, and the region of structured precipitation of...  相似文献   

Inter- and intra-annual trend analysis of water level and flow in the middle and lower reaches of the Ganjiang River,China     

Di Zhu  Yue Ben  Xinfa Xu 《水文科学杂志》2020,65(12):2128-2141

ABSTRACT

The Ganjiang River is the largest tributary of Poyang Lake in China, and its hydrological regime variation greatly affects the utilization of regional water resources and the ecological environment of the lake. In this study, a novel trend analysis method, the Moving Average over Shifting Horizon (MASH), was applied to investigate the inter- and intra-annual trends of flow and water level from 1976 to 2016 at the Xiajiang and the Waizhou hydrological stations in the Ganjiang River. The Significant Change Rate Method (SCRM) was proposed to determine the MASH averaging parameters. The trend analysis results show a statistically significant decrease in water level series throughout the year and the relationship of flow and water level have changed greatly at the Waizhou station. The sediment load reduction, large-scale sand mining and water level decrease of Poyang Lake are identified as the main causes for the water level decrease.  相似文献   

Bound and mobile soil water isotope ratios are affected by soil texture and mineralogy,whereas extraction method influences their measurement     

Rachel E. Adams  Ayumi Hyodo  Toby SantaMaria  Cynthia L. Wright  Thomas W. Boutton  Jason B. West 《水文研究》2020,34(4):991-1003

Questions persist about interpreting isotope ratios of bound and mobile soil water pools, particularly relative to clay content and extraction conditions. Interactions between pools and resulting extracted water isotope composition are presumably related to soil texture, yet few studies have manipulated the bound pool to understand its influence on soil water processes. Using a series of drying and spiking experiments, we effectively labelled bound and mobile water pools in soils with varying clay content. Soils were first vacuum dried to remove residual water, which was then replaced with heavy isotope-enriched water prior to oven drying and spiking with heavy isotope-depleted water. Water was extracted via centrifugation or cryogenic vacuum distillation (at four temperatures) and analysed for oxygen and hydrogen isotope ratios via isotope ratio mass spectrometry. Water from centrifuged samples fell along a mixing line between the two added waters but was more enriched in heavy isotopes than the depleted label, demonstrating that despite oven drying, a residual pool remains and mixes with the mobile water. Soils with higher clay + silt content appeared to have a larger bound pool. Water from vacuum distillation samples have a significant temperature effect, with high temperature extractions yielding progressively more heavy isotope-enriched values, suggesting that Rayleigh fractionation occurred at low temperatures in the vacuum line. By distinctly labelling bound and mobile soil water pools, we detected interactions between the two that were dependent on soil texture. Although neither extraction method appeared to completely extract the combined bound and mobile (total water) pool, centrifugation and high temperature cryogenic vacuum distillations were comparable for both δ²H and δ¹⁸O of soil water isotope ratios.  相似文献